WormBase Tree Display for CDS: C48B6.6a

C48B6.6a Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: C48B6
  Structure: Source_exons (42)
  DB_info: Database: KEGG KEGG_id 2.7.11.1
      SwissProt UniProtAcc O01510
        UniProtIsoformAcc O01510-1
      UniProt UniProtAcc O01510
      UniProt_GCRP UniProtAcc O01510
      AlphaFold entry O01510
      NCBI_protein GI_number GI:373219374
      TREEFAM TREEFAM_ID TF352560
    Protein_id: CHROMOSOME_I CCD67583 1
    DB_remark: SMG-1 protein; contains similarity to Pfam domains PF00454 (Phosphatidylinositol 3- and 4-kinase), PF02260 (FATC domain), PF15785 (Serine/threonine-protein kinase smg-1); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000403 (Phosphatidylinositol 3-/4-kinase, catalytic domain), IPR031559 (Serine/threonine-protein kinase SMG1), IPR016024 (Armadillo-type fold), IPR036940 (Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily), IPR003152 (FATC domain)
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Properties: Coding (2)
    Isoform: Accession_evidence: EMBL AF149821
  Visible: Gene: WBGene00004879
    Corresponding_transcript: C48B6.6a.1
    Corresponding_protein: CE30258
    Corresponding_PCR_product: cenix:71-a5
      cenix:71-b5
      mv_AAD48773
      mv_C48B6.7
      sjj_C48B6.6
      sjj_C48B6.7
    Corresponding_oligo_set (20)
    Matching_cDNA (52)
    RNAi_result (20)
    Microarray_results (22)
    Brief_identification: Serine/threonine-protein kinase smg-1 Accession_evidence: UniProt SP:O01510
    RNASeq_FPKM (74)
    Last_reviewed: 01 Jul 2004 00:00:00 WBPerson1867
    Remark: [010516 js] merged in C48B6.7 based on mRNA data - Curator_confirmed: WBPerson615
      [020124 js] changed the 5' splice site in intron 21 based on mRNA data (AF149821) - Curator_confirmed: WBPerson615
  Associated_feature: WBsf027457
  Method: curated