WormBase Tree Display for CDS: F16H9.1b
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| F16H9.1b | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_X | |||
| Structure | Source_exons | 1 | 83 | |||
| 12979 | 13023 | |||||
| 13864 | 13925 | |||||
| 13975 | 14093 | |||||
| 14676 | 14912 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G5EFV0 | ||
| UniProt | UniProtAcc | G5EFV0 | ||||
| AlphaFold | entry | G5EFV0 | ||||
| NCBI_protein | GI_number | GI:5824457 | ||||
| Protein_id | CHROMOSOME_X | CAB54219 | 1 | |||
| DB_remark | RGS-2 protein; contains similarity to Pfam domain PF00615 (Regulator of G protein signaling domain); contains similarity to Interpro domains IPR036305 (RGS domain superfamily), IPR044926 (RGS, subdomain 2), IPR024066 (RGS, subdomain 1/3), IPR016137 (RGS domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | CB403581 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00004345 | ||||
| Corresponding_transcript | F16H9.1b.1 | |||||
| Corresponding_protein | CE23666 | |||||
| Corresponding_PCR_product | cenix:135-a3 | |||||
| mv_F16H9.1a | ||||||
| sjj_F16H9.1 | ||||||
| Corresponding_oligo_set (21) | ||||||
| Matching_cDNA (11) | ||||||
| RNAi_result | WBRNAi00112305 | |||||
| WBRNAi00044841 | ||||||
| WBRNAi00013436 | ||||||
| WBRNAi00031054 | ||||||
| WBRNAi00112304 | ||||||
| WBRNAi00112307 | ||||||
| WBRNAi00112306 | ||||||
| WBRNAi00112303 | ||||||
| WBRNAi00112308 | ||||||
| WBRNAi00112309 | ||||||
| Microarray_results (24) | ||||||
| Brief_identification | RGS domain-containing protein | Accession_evidence | UniProt | TR:G5EFV0 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 25 Apr 2019 17:02:00 | WBPerson4025 | ||||
| Remark | [ms2 990811] splice variant of .1a, based on EST data | |||||
| [190425 gw3] This CDS has been inspected and looks satisfactory. | Curator_confirmed | WBPerson4025 | ||||
| From_analysis | RNASeq | |||||
| Associated_feature | WBsf000749 | |||||
| Method | curated |
