WormBase Tree Display for CDS: H38K22.2a

H38K22.2a SMap: S_parent: Sequence: H38K22
  Structure: Source_exons: 1 33
      859 1017
      1375 1653
      2114 2530
  DB_info: Database: SwissProt UniProtAcc Q9U3C8
        UniProtIsoformAcc Q9U3C8-1
      UniProt UniProtAcc Q9U3C8
      UniProt_GCRP UniProtAcc Q9U3C8
      AlphaFold entry Q9U3C8
      NCBI_protein GI_number GI:29292248
      TREEFAM TREEFAM_ID TF313332
    Protein_id: CHROMOSOME_III CAB54261 2
    DB_remark: DCN-1 protein; contains similarity to Pfam domains PF03556 (Cullin binding), PF14555 (UBA-like domain); contains similarity to Interpro domains IPR042460 (DCN1-like, PONY binding domain), IPR005176 (Potentiating neddylation domain), IPR009060 (UBA-like superfamily), IPR014764 (Defective-in-cullin neddylation protein)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Accession_evidence: NDB CV123565
      Inferred_automatically: transcript_builder
  Visible: Gene: WBGene00010428
    Corresponding_transcript: H38K22.2a.1
      H38K22.2a.2
    Corresponding_protein: CE33527
    Corresponding_PCR_product: TH:300c3
      TH:340g12
      cenix:300-c3
      cenix:340-g12
      mv_H38K22.2
      mv_H38K22.2a
      mv_H38K22.2b
      sjj_H38K22.2
    Corresponding_oligo_set (18)
    Matching_cDNA (51)
    RNAi_result (27)
    Microarray_results (20)
    Brief_identification: Defective in cullin neddylation protein 1 Accession_evidence: UniProt SP:Q9U3C8
    RNASeq_FPKM (74)
    Remark: [ms2 990816] shortened the 1st exon, based on EST data
      [030212 ar2] Removed final exon as transcript suggests stop codon in previous one. Curator_confirmed: WBPerson1847
  Associated_feature: WBsf015935
  Method: curated