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WormBase Tree Display for CDS: M142.1b

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Name Class

M142.1bEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceM142
StructureSource_exons1112
183563
10511157
DB_infoDatabaseTrEMBLUniProtAccC0P283
UniProtUniProtAccC0P283
AlphaFoldentryC0P283
NCBI_proteinGI_numberGI:224492561
Protein_idCHROMOSOME_IIICAX516831
DB_remarkUNC-119 protein; contains similarity to Pfam domain PF05351 (GMP-PDE, delta subunit); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR037036 (GMP phosphodiesterase, delta subunit superfamily), IPR008015 (GMP phosphodiesterase, delta subunit)
Origin (2)
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformFeature_evidenceWBsf022294
VisibleGeneWBGene00006843
Corresponding_transcriptM142.1b.1
Corresponding_proteinCE43523
Corresponding_PCR_productTH:324A11
cenix:324-a11
mv_AAC46919
sjj2_M142.1
sjj_M142.1
smd_M142.1
Corresponding_oligo_set (17)
Matching_cDNA (19)
RNAi_result (13)
Microarray_results (20)
Brief_identificationGMP phosphodiesterase delta subunit domain-containing proteinAccession_evidenceUniProtTR:C0P283
RNASeq_FPKM (74)
Last_reviewed16 Nov 2009 00:00:00WBPerson1983
Remark[090220 pad] Alternate isoform entered to represent SL1 feature data. This SL1 site causes the removal of exon 1 truncating the protein by 20 amino acids.Curator_confirmedWBPerson1983
Feature_evidenceWBsf022294
Methodcurated