WormBase Tree Display for CDS: M142.1b
expand all nodes | collapse all nodes | view schema
M142.1b | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | M142 | |||
Structure | Source_exons | 1 | 112 | |||
183 | 563 | |||||
1051 | 1157 | |||||
DB_info | Database | TrEMBL | UniProtAcc | C0P283 | ||
UniProt | UniProtAcc | C0P283 | ||||
AlphaFold | entry | C0P283 | ||||
NCBI_protein | GI_number | GI:224492561 | ||||
Protein_id | CHROMOSOME_III | CAX51683 | 1 | |||
DB_remark | UNC-119 protein; contains similarity to Pfam domain PF05351 (GMP-PDE, delta subunit); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR037036 (GMP phosphodiesterase, delta subunit superfamily), IPR008015 (GMP phosphodiesterase, delta subunit) | |||||
Origin (2) | ||||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Feature_evidence | WBsf022294 | ||||
Visible | Gene | WBGene00006843 | ||||
Corresponding_transcript | M142.1b.1 | |||||
Corresponding_protein | CE43523 | |||||
Corresponding_PCR_product | TH:324A11 | |||||
cenix:324-a11 | ||||||
mv_AAC46919 | ||||||
sjj2_M142.1 | ||||||
sjj_M142.1 | ||||||
smd_M142.1 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (19) | ||||||
RNAi_result (13) | ||||||
Microarray_results (20) | ||||||
Brief_identification | GMP phosphodiesterase delta subunit domain-containing protein | Accession_evidence | UniProt | TR:C0P283 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 16 Nov 2009 00:00:00 | WBPerson1983 | ||||
Remark | [090220 pad] Alternate isoform entered to represent SL1 feature data. This SL1 site causes the removal of exon 1 truncating the protein by 20 amino acids. | Curator_confirmed | WBPerson1983 | |||
Feature_evidence | WBsf022294 | |||||
Method | curated |