WormBase Tree Display for CDS: R12B2.1b
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| R12B2.1b | SMap | S_parent | Sequence | R12B2 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 86 | |||
| 135 | 300 | |||||
| 346 | 447 | |||||
| 756 | 878 | |||||
| 927 | 1019 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q2L6Y5 | ||
| UniProt | UniProtAcc | Q2L6Y5 | ||||
| AlphaFold | entry | Q2L6Y5 | ||||
| NCBI_protein | GI_number | GI:373220414 | ||||
| Protein_id | CHROMOSOME_III | CCD73314 | 1 | |||
| DB_remark | SMA-4 protein; contains similarity to Pfam domain PF03166 (MH2 domain); contains similarity to Interpro domains IPR008984 (SMAD/FHA domain superfamily), IPR013790 (Dwarfin), IPR001132 (SMAD domain, Dwarfin-type), IPR017855 (SMAD-like domain superfamily) | |||||
| Origin (2) | ||||||
| Properties | Coding (2) | |||||
| Isoform | Feature_evidence | WBsf021884 | ||||
| Visible | Gene | WBGene00004858 | ||||
| Corresponding_transcript | R12B2.1b.1 | |||||
| Corresponding_protein | CE39618 | |||||
| Corresponding_PCR_product | TH:301H10 | |||||
| cenix:301-h10 | ||||||
| mv_AAA97605 | ||||||
| sjj_R12B2.1 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_81852 | |||||
| L2_Nanopore_Roach_100863 | ||||||
| adult_Nanopore_Roach_87290 | ||||||
| male_Nanopore_Roach_15945 | ||||||
| L3_Nanopore_Roach_95709 | ||||||
| adult_Nanopore_Roach_12821 | ||||||
| RNAi_result (17) | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | MH2 domain-containing protein | Accession_evidence | UniProt | TR:Q2L6Y5 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 17 Jan 2006 00:00:00 | WBPerson1867 | ||||
| Remark | [20060117 po] added this isoform based on SLTEC-RED data | Curator_confirmed | WBPerson1867 | |||
| Method | curated |
