WormBase Tree Display for CDS: W08A12.1a
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W08A12.1a | SMap | S_parent | Sequence | W08A12 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 47 | |||
3960 | 4224 | |||||
5441 | 5494 | |||||
6415 | 6945 | |||||
7490 | 7993 | |||||
9226 | 9330 | |||||
DB_info | Database (6) | |||||
Protein_id | CHROMOSOME_V | CCD74290 | 1 | |||
DB_remark | UNC-132 protein; contains similarity to Pfam domain PF13521 (AAA domain); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR038727 (NadR/Ttd14, AAA domain), IPR033469 (CYTH-like domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Isoform | Accession_evidence | EMBL | AU199565 | |||
Visible | Gene | WBGene00021078 | ||||
Corresponding_transcript | W08A12.1a.1 | |||||
Corresponding_protein | CE30205 | |||||
Corresponding_PCR_product | cenix:48-d9 | |||||
mv_W08A12.1 | ||||||
sjj2_W08A12.1a | ||||||
sjj_W08A12.1 | ||||||
Corresponding_oligo_set (22) | ||||||
Matching_cDNA (37) | ||||||
RNAi_result | WBRNAi00036369 | |||||
WBRNAi00097780 | ||||||
WBRNAi00054968 | ||||||
WBRNAi00097779 | ||||||
Microarray_results (28) | ||||||
Brief_identification | NadR/Ttd14 AAA domain-containing protein | Accession_evidence | UniProt | TR:O01619 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 07 Mar 2016 14:09:47 | WBPerson4025 | ||||
Remark | [011231 db] added N-terminal exon based on EST data | Curator_confirmed | WBPerson1848 | |||
Associated_feature | WBsf002520 | |||||
Method | curated |