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WormBase Tree Display for CDS: W08A12.1a

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Name Class

W08A12.1aSMapS_parentSequenceW08A12
StructureSource_exons147
39604224
54415494
64156945
74907993
92269330
DB_infoDatabase (6)
Protein_idCHROMOSOME_VCCD742901
DB_remarkUNC-132 protein; contains similarity to Pfam domain PF13521 (AAA domain); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR038727 (NadR/Ttd14, AAA domain), IPR033469 (CYTH-like domain superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformAccession_evidenceEMBLAU199565
VisibleGeneWBGene00021078
Corresponding_transcriptW08A12.1a.1
Corresponding_proteinCE30205
Corresponding_PCR_productcenix:48-d9
mv_W08A12.1
sjj2_W08A12.1a
sjj_W08A12.1
Corresponding_oligo_set (22)
Matching_cDNA (37)
RNAi_resultWBRNAi00036369
WBRNAi00097780
WBRNAi00054968
WBRNAi00097779
Microarray_results (28)
Brief_identificationNadR/Ttd14 AAA domain-containing proteinAccession_evidenceUniProtTR:O01619
RNASeq_FPKM (74)
Last_reviewed07 Mar 2016 14:09:47WBPerson4025
Remark[011231 db] added N-terminal exon based on EST dataCurator_confirmedWBPerson1848
Associated_featureWBsf002520
Methodcurated