WormBase Tree Display for CDS: Y113G7A.6c

Y113G7A.6c Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: Y113G7A
  Structure: Source_exons: 1 18
      139 207
      991 1149
      2334 2557
      2679 2829
      3485 3576
      3806 4053
      5508 5611
  DB_info: Database: SwissProt UniProtAcc Q9U2Z0
        UniProtIsoformAcc Q9U2Z0-3
      UniProt UniProtAcc Q9U2Z0
      UniProt_GCRP UniProtAcc Q9U2Z0
      AlphaFold entry Q9U2Z0
      NCBI_protein GI_number GI:198446798
    Protein_id: CHROMOSOME_V CAR64688 1
    DB_remark: TTX-1 protein; contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Feature_evidence: WBsf000137
  Visible: Gene: WBGene00006652
    Corresponding_transcript: Y113G7A.6c.1
    Corresponding_protein: CE43026
    Corresponding_PCR_product: cenix:49-f6
      cenix:49-g6
      mv_Y113G7A.6A
      sjj_Y113G7A.6A
      sjj_Y113G7A.6B
      smd_Y113G7A.6B
    Corresponding_oligo_set (25)
    Matching_cDNA: L3_Nanopore_Roach_880
    RNAi_result: WBRNAi00065644
      WBRNAi00055387
      WBRNAi00055388
      WBRNAi00106223
    Microarray_results (29)
    Brief_identification: Homeobox protein ttx-1 Accession_evidence: UniProt SP:Q9U2Z0
    RNASeq_FPKM (74)
    Last_reviewed: 31 Aug 2017 10:55:40 WBPerson4025
    Remark: [080819 gw3] Created this isoform based on the SL1 site. Curator_confirmed: WBPerson4025
      [170831 gw3] This CDS has been inspected and looks satisfactory. Curator_confirmed: WBPerson4025
        From_analysis: RNASeq
  Method: curated