| CRE16922 | SMap | S_parent | Sequence | Crem_Contig65 |
|---|
| Structure | Source_exons (11) |
| DB_info | Database | TREEFAM | TREEFAM_ID | TF351263 |
| | DB_remark | CRE-UNC-44 protein; contains similarity to Pfam domains PF00023 (Ankyrin repeat), PF00531 (Death domain), PF00791 (ZU5 domain), PF12796 (Ankyrin repeats (3 copies)), PF13637 (Ankyrin repeats (many copies)), PF13857 (Ankyrin repeats (many copies)), PF17809 (UPA domain); contains similarity to Interpro domains IPR011029 (Death-like domain superfamily), IPR002110 (Ankyrin repeat), IPR040745 (Ankyrin, UPA domain), IPR000488 (Death domain), IPR020683 (Domain of unknown function DUF3447), IPR000906 (ZU5 domain), IPR036770 (Ankyrin repeat-containing domain superfamily) |
| Origin | From_laboratory | RW |
| | Species | Caenorhabditis remanei |
| Properties | Coding | CDS |
| | | Prediction_status | Partially_confirmed |
| Visible | Gene | WBGene00073146 |
| | Corresponding_transcript | CRE16922.1 |
| | Corresponding_protein | RP29680 |
| | Matching_cDNA | DR409474 | Inferred_automatically | transcript_builder.pl |
| | | DR777325 | Inferred_automatically | transcript_builder.pl |
| | | DY525722 | Inferred_automatically | transcript_builder.pl |
| | RNASeq_FPKM | WBls:0000004 | 23.7868 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881 |
| | | | 25.3262 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882 |
| | | WBls:0000024 | 100.979 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993 |
| | | | 105.745 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990 |
| | | | 156.39 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986 |
| | | | 156.648 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987 |
| | | | 34.925 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018 |
| | | | 36.6603 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019 |
| | | | 45.7664 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995 |
| | | | 45.8405 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994 |
| | | | 47.2448 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006 |
| | | | 47.5638 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013 |
| | | | 49.0245 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007 |
| | | | 49.186 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016 |
| | | | 51.5318 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012 |
| | | | 54.3239 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801 |
| | | | 57.2228 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798 |
| | | | 58.0857 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311803 |
| | | | 58.5045 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017 |
| | | | 60.5534 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802 |
| | | | 65.9604 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015 |
| | | | 66.0615 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996 |
| | | | 66.4135 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020 |
| | | | 67.9734 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021 |
| | | | 71.5052 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997 |
| | | | 71.5083 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989 |
| | | | 72.4149 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988 |
| | | | 72.7456 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008 |
| | | | 73.6525 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001 |
| | | | 74.8588 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009 |
| | | | 75.7347 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991 |
| | | | 76.0906 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014 |
| | | | 78.5198 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998 |
| | | | 81.0165 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000 |
| | | | 84.1829 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003 |
| | | | 85.0456 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800 |
| | | | 85.5567 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002 |
| | | | 85.9393 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011 |
| | | | 86.3063 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004 |
| | | | 89.8972 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999 |
| | | | 91.0436 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799 |
| | | | 94.9941 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010 |
| | | | 95.5599 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005 |
| | | | 99.358 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992 |
| | | | 101.5 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479 |
| | | | 103.67 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484 |
| | | | 104.707 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481 |
| | | | 123.387 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480 |
| | | | 64.7201 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488 |
| | | | 67.4621 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485 |
| | | | 68.6616 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486 |
| | | | 75.6665 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490 |
| | | | 77.7739 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482 |
| | | | 77.9096 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487 |
| | | | 78.263 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489 |
| | | | 89.9819 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483 |
| | | WBls:0000027 | 100.507 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883 |
| | | | 102.915 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885 |
| | | | 21.6299 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082 |
| | | | 99.2071 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884 |
| | | WBls:0000038 | 24.0327 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083 |
| | | | 43.1051 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879 |
| | | | 43.1116 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880 |
| | | WBls:0000041 | 13.015 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975 |
| | | | 13.5929 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974 |
| | | | 15.7305 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976 |
| | | | 7.50441 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972 |
| | | | 8.49949 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973 |
| | | | 9.70902 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971 |
| | | WBls:0000063 | 22.1307 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892 |
| | | | 23.721 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887 |
| | | | 27.7006 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888 |
| | | | 29.2212 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886 |
| | | | 31.5144 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890 |
| | | | 31.6897 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893 |
| | | | 33.4391 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891 |
| | | | 34.0457 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889 |
| | | | 35.256 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895 |
| | | | 39.838 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894 |
| Method | curated |
