| CRE18787 | SMap | S_parent | Sequence | Crem_Contig3 |
|---|
| Structure | Source_exons (13) |
| DB_info | DB_remark | CRE-EGL-2 protein; contains similarity to Pfam domains PF00027 (Cyclic nucleotide-binding domain), PF00520 (Ion transport protein), PF13426 (PAS domain); contains similarity to Interpro domains IPR003949 (Potassium channel, voltage-dependent, EAG), IPR018490 (Cyclic nucleotide-binding domain superfamily), IPR000595 (Cyclic nucleotide-binding domain), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR000014 (PAS domain), IPR005821 (Ion transport domain), IPR027359 (Voltage-dependent channel domain superfamily), IPR035965 (PAS domain superfamily), IPR014710 (RmlC-like jelly roll fold) |
| Origin | From_laboratory | RW |
| | Species | Caenorhabditis remanei |
| Properties | Coding | CDS |
| | | Prediction_status | Predicted |
| Visible | Gene | WBGene00062089 |
| | Corresponding_transcript | CRE18787.1 |
| | Corresponding_protein | RP41905 |
| | Corresponding_oligo_set | GPL14146_CRE18787_1976-2035_0.897_12_B |
| | | GPL14146_CRE18787_2043-2102_0.884_20_A |
| | | GPL14146_CRE18787_2543-2602_0.909_5_C |
| | Microarray_results | GPL14146_CRE18787_1976-2035_0.897_12_B |
| | | GPL14146_CRE18787_2043-2102_0.884_20_A |
| | | GPL14146_CRE18787_2543-2602_0.909_5_C |
| | RNASeq_FPKM | WBls:0000004 | 0.659644 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882 |
| | | | 1.19153 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881 |
| | | WBls:0000024 | 10.6194 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801 |
| | | | 10.8441 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990 |
| | | | 11.8069 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799 |
| | | | 12.5702 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999 |
| | | | 13.0179 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993 |
| | | | 13.1483 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800 |
| | | | 22.0761 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986 |
| | | | 23.3468 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987 |
| | | | 3.3978 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018 |
| | | | 3.56019 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994 |
| | | | 3.63286 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007 |
| | | | 3.97306 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019 |
| | | | 4.41883 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006 |
| | | | 4.52898 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995 |
| | | | 4.84339 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017 |
| | | | 4.90381 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016 |
| | | | 4.9197 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997 |
| | | | 5.09834 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996 |
| | | | 5.25294 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012 |
| | | | 5.36363 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008 |
| | | | 5.60065 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009 |
| | | | 5.68465 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020 |
| | | | 5.90839 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021 |
| | | | 6.64978 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013 |
| | | | 6.98257 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991 |
| | | | 7.06318 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003 |
| | | | 7.17078 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798 |
| | | | 7.6539 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001 |
| | | | 7.68396 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802 |
| | | | 8.05446 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014 |
| | | | 8.08247 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004 |
| | | | 8.18486 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015 |
| | | | 8.32329 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002 |
| | | | 8.54292 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988 |
| | | | 8.55058 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010 |
| | | | 8.60635 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989 |
| | | | 9.08732 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992 |
| | | | 9.12424 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005 |
| | | | 9.23936 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311803 |
| | | | 9.35652 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000 |
| | | | 9.40483 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998 |
| | | | 9.50681 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011 |
| | | | 11.0488 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484 |
| | | | 13.8226 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479 |
| | | | 15.1691 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480 |
| | | | 4.87272 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481 |
| | | | 5.5453 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488 |
| | | | 6.83662 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486 |
| | | | 7.85776 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489 |
| | | | 7.92696 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482 |
| | | | 8.2159 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485 |
| | | | 8.48676 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487 |
| | | | 8.63198 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490 |
| | | | 9.13404 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483 |
| | | WBls:0000027 | 0.61372 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082 |
| | | | 10.0154 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885 |
| | | | 7.76673 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884 |
| | | | 9.32615 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883 |
| | | WBls:0000038 | 1.58185 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083 |
| | | | 4.65026 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879 |
| | | | 4.93972 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880 |
| | | WBls:0000041 | 0.314809 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971 |
| | | | 0.363496 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972 |
| | | | 0.417438 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973 |
| | | | 1.62221 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976 |
| | | | 1.76591 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974 |
| | | | 1.95704 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975 |
| | | WBls:0000063 | 0.371356 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886 |
| | | | 0.567428 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888 |
| | | | 0.989289 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887 |
| | | | 0.99726 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890 |
| | | | 0 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892 |
| | | | 1.36832 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894 |
| | | | 1.41118 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893 |
| | | | 1.57675 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889 |
| | | | 2.55884 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895 |
| | | | 2.99609 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891 |
| Method | curated |
