WormBase Tree Display for CDS: B0410.2b
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| B0410.2b | SMap | S_parent | Sequence | B0410 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 156 | |||
| 969 | 1102 | |||||
| 1162 | 1285 | |||||
| 1338 | 1556 | |||||
| 2324 | 2766 | |||||
| 3111 | 3329 | |||||
| 3381 | 3549 | |||||
| 4305 | 4430 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q95ZZ6 | ||
| UniProt | UniProtAcc | Q95ZZ6 | ||||
| AlphaFold | entry | Q95ZZ6 | ||||
| NCBI_protein | GI_number | GI:373218601 | ||||
| Protein_id | CHROMOSOME_X | CCD61853 | 1 | |||
| DB_remark | VANG-1 protein; contains similarity to Pfam domain PF06638 (Strabismus protein); contains similarity to Interpro domain IPR009539 (Vang-like protein) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | C44187 | |||
| Visible | Gene | WBGene00015171 | ||||
| Corresponding_transcript | B0410.2b.1 | |||||
| Corresponding_protein | CE27572 | |||||
| Corresponding_PCR_product | cenix:156-b12 | |||||
| cenix:67-f1 | ||||||
| mv_B0410.2 | ||||||
| sjj_B0410.2 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_14455 | |||||
| L2_Nanopore_Roach_13672 | ||||||
| male_Nanopore_Roach_25894 | ||||||
| adult_Nanopore_Roach_5840 | ||||||
| RNAi_result | WBRNAi00112514 | |||||
| WBRNAi00039028 | ||||||
| WBRNAi00039029 | ||||||
| WBRNAi00028127 | ||||||
| WBRNAi00009755 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | Vang-like protein | Accession_evidence | UniProt | TR:Q95ZZ6 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
