WormBase Tree Display for CDS: Bm12258
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Bm12258 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |
---|---|---|---|---|---|
Structure | Source_exons (31) | ||||
DB_info | Database | TrEMBL | UniProtAcc | A0A0H5SDT8 | |
UniProt | UniProtAcc | A0A0H5SDT8 | |||
AlphaFold | entry | A0A0H5SDT8 | |||
Protein_id | Bm_v4_ChrX_scaffold_001 | CRZ26308 | 1 | ||
DB_remark | BMA-UNC-10 protein; contains similarity to Pfam domains PF00168 (C2 domain), PF00595 (PDZ domain), PF02318 (FYVE-type zinc finger); contains similarity to Interpro domains IPR041282 (FYVE-type zinc finger), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR039032 (Rim-like), IPR011011 (Zinc finger, FYVE/PHD-type), IPR035892 (C2 domain superfamily), IPR000008 (C2 domain) | ||||
Origin | From_laboratory | HX | |||
Species | Brugia malayi | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | exonerate | ||||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00232519 | |||
Corresponding_transcript | Bm12258.1 | ||||
Corresponding_protein | BM41580 | ||||
Matching_cDNA | brugia_GG6658|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||
brugia_GG6658|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
IsoSeq_brugia_PB_7373_2 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM (10) | |||||
Remark | [131112 pad] Renamed from Bm12258a as this is a single Isoform locus. | Curator_confirmed | WBPerson1983 | ||
Method | curated |