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WormBase Tree Display for CDS: Bm13816

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Name Class

Bm13816SMapS_parentSequenceBm_v4_Chr1_scaffold_001
StructureSource_exons (19)
DB_infoDatabaseKEGGKEGG_id6.1.1.18
TrEMBLUniProtAccA0A0H5SG12
UniProtUniProtAccA0A0H5SG12
AlphaFoldentryA0A0H5SG12
Protein_idBm_v4_Chr1_scaffold_001CRZ228421
DB_remarkBMA-QARS-1 protein; contains similarity to Pfam domains PF00749 (tRNA synthetases class I (E and Q), catalytic domain), PF03950 (tRNA synthetases class I (E and Q), anti-codon binding domain), PF04557 (Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2), PF04558 (Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1); contains similarity to Interpro domains IPR020056 (Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal), IPR007639 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal), IPR000924 (Glutamyl/glutaminyl-tRNA synthetase), IPR004514 (Glutamine-tRNA synthetase), IPR020059 (Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain), IPR020058 (Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain), IPR011035 (Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily), IPR007638 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR042559 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 2), IPR042558 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 1)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
VisibleGeneWBGene00234077
Corresponding_transcriptBm13816.1
Corresponding_proteinBM41250
Matching_cDNAbrugia_GG8|c9_g1_i1Inferred_automaticallytranscript_builder.pl
IsoSeq_brugia_PB_296_1Inferred_automaticallytranscript_builder.pl
Brief_identificationglutaminyl-tRNA synthetase, putativeAccession_evidenceTIGRBm1_12965
RNASeq_FPKMWBls:000007811.7471From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
14.429From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
14.4934From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
15.4947From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
17.3976From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
18.5327From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
18.6292From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:000008033.1825From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
35.3762From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
36.4693From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
37.4219From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (23)
WBls:000008213.9207From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
16.1438From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
18.9673From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
19.9846From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
21.0131From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (80)
WBls:000009234.1096From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
35.8151From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:000009425.3101From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
26.5809From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:000009716.592From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
32.9242From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
36.6206From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
36.6877From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
40.7764From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
51.0997From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
WBls:000066218.2469From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
22.8268From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066327.2911From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Remark[131112 pad] Renamed from Bm13816a as this is a single Isoform locus.Curator_confirmedWBPerson1983
Methodcurated