WormBase Tree Display for CDS: Bm3195b
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Bm3195b | Evidence | Curator_confirmed (2) | |||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
Structure | Source_exons | 1 | 21 | ||
179 | 595 | ||||
685 | 760 | ||||
959 | 1232 | ||||
1463 | 1574 | ||||
DB_info | Database | TrEMBL | UniProtAcc | A8PLN6 | |
UniProt | UniProtAcc | A8PLN6 | |||
AlphaFold | entry | A8PLN6 | |||
UniProt_GCRP | UniProtAcc | A8PLN6 | |||
Protein_id | Bm_v4_ChrX_scaffold_001 | CDP94440 | 1 | ||
DB_remark | contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type) | ||||
Origin | From_laboratory | HX | |||
Species | Brugia malayi | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | RATT | ||||
Prediction_status | Confirmed | ||||
Isoform | Inferred_automatically | xace | |||
Visible | Gene | WBGene00223456 | |||
Corresponding_transcript (2) | |||||
Corresponding_protein | BM49172 | ||||
Matching_cDNA | AI083383 | Inferred_automatically | transcript_builder.pl | ||
brugia_GG5729|c27_g1_i2 | Inferred_automatically | transcript_builder.pl | |||
W59897 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM (10) | |||||
Last_reviewed | 24 Jul 2019 15:54:31 | WBPerson4055 | |||
Remark | [190724 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||
From_analysis | RNASeq | ||||
Method | curated |