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WormBase Tree Display for CDS: Bm4229

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Name Class

Bm4229EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceBm_v4_ChrX_scaffold_001
StructureSource_exons (21)
DB_infoDatabaseKEGGKEGG_id3.4.11.-
TrEMBLUniProtAccA0A0H5S2I9
UniProtUniProtAccA0A0H5S2I9
AlphaFoldentryA0A0H5S2I9
UniProt_GCRPUniProtAccA0A0H5S2I9
Protein_idBm_v4_ChrX_scaffold_001CRZ227041
DB_remarkBMA-PAM-1 protein; contains similarity to Pfam domains PF01433 (Peptidase family M1 domain), PF11838 (ERAP1-like C-terminal domain), PF17900 (Peptidase M1 N-terminal domain); contains similarity to Interpro domains IPR045357 (Aminopeptidase N-like , N-terminal domain), IPR027268 (Peptidase M4/M1, CTD superfamily), IPR014782 (Peptidase M1, membrane alanine aminopeptidase), IPR042097 (Aminopeptidase N-like , N-terminal domain superfamliy), IPR024571 (ERAP1-like C-terminal domain), IPR001930 (Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
VisibleGeneWBGene00224490
Corresponding_transcriptBm4229.1
Corresponding_proteinBM34282
Matching_cDNAbrugia_GG2548|c17_g2_i4Inferred_automaticallytranscript_builder.pl
brugia_GG2548|c17_g2_i3Inferred_automaticallytranscript_builder.pl
AW191582Inferred_automaticallytranscript_builder.pl
brugia_GG2548|c17_g1_i1Inferred_automaticallytranscript_builder.pl
IsoSeq_brugia_PB_6744_5Inferred_automaticallytranscript_builder.pl
brugia_GG2548|c17_g2_i1Inferred_automaticallytranscript_builder.pl
brugia_GG2548|c17_g2_i2Inferred_automaticallytranscript_builder.pl
Brief_identificationPeptidase family M1 containing proteinAccession_evidenceTIGRBm1_27885
RNASeq_FPKMWBls:0000078100.225From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
100.275From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
53.6411From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
55.6093From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
59.8813From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
83.8358From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
87.1229From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
WBls:0000080158.511From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
166.643From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
182.905From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
187.918From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (23)
WBls:000008270.7037From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
76.1448From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
76.2065From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
76.4228From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
89.569From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (80)
WBls:000009264.5254From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
68.9672From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:000009454.0427From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
54.2307From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:0000097160.386From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
199.749From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
219.291From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
232.074From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
243.79From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
86.7251From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000066283.6743From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
90.8491From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066355.7829From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Remark[131112 pad] Renamed from Bm4229c as this is a single Isoform locus.Curator_confirmedWBPerson1983
Methodcurated