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WormBase Tree Display for CDS: Bm6109a

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Name Class

Bm6109aEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons (34)
DB_infoDatabaseTrEMBLUniProtAccA0A0J9XKZ1
UniProtUniProtAccA0A0J9XKZ1
AlphaFoldentryA0A0J9XKZ1
Protein_idBm_v4_Chr4_scaffold_001CDP905801
DB_remarkcontains similarity to Pfam domains PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF00086 (Thyroglobulin type-1 repeat), PF14625 (Lustrin, cysteine-rich repeated domain); contains similarity to Interpro domains IPR000716 (Thyroglobulin type-1), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain), IPR028150 (Lustrin, cysteine-rich repeated), IPR036857 (Thyroglobulin type-1 superfamily), IPR006150 (Cysteine-rich repeat), IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byaugustus
Prediction_statusPartially_confirmed
IsoformInferred_automaticallyxace
VisibleGeneWBGene00226370
Corresponding_transcriptBm6109a.1
Corresponding_proteinBM40125
Matching_cDNAbrugia_GG7155|c3_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG7155|c5_g2_i2Inferred_automaticallytranscript_builder.pl
brugia_GG7155|c5_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG7154|c0_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG7155|c4_g1_i1Inferred_automaticallytranscript_builder.pl
Brief_identificationKunitz/Bovine pancreatic trypsin inhibitor domain containing proteinAccession_evidenceTIGRBm1_17130
RNASeq_FPKMWBls:00000780.207549From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
0.326819From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
0.501573From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
0.516441From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
0.529149From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
0.534786From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
0.85458From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
WBls:000008010.3996From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
13.7292From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
15.0587From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
16.8955From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (23)
WBls:00000820.041924From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
0.073173From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
0.08854From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
2.19589From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
5.41311From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (80)
WBls:000009223.9585From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
25.2932From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009442.8943From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
43.7154From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:00000970.225304From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
0.39996From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
0.49326From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
0.531558From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
2.1356From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
WBls:00006620.083361From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
0.399734From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:00006630.185355From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Methodcurated