WormBase Tree Display for CDS: Bm7343
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| Bm7343 | Evidence | Curator_confirmed | WBPerson4055 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Bm_v4_Chr1_scaffold_001 | |||
| Structure | Source_exons (13) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A0K0JRY7 | ||
| UniProt | UniProtAcc | A0A0K0JRY7 | ||||
| AlphaFold | entry | A0A0K0JRY7 | ||||
| UniProt_GCRP | UniProtAcc | A0A0K0JRY7 | ||||
| Protein_id | Bm_v4_Chr1_scaffold_001 | CDP95269 | 1 | |||
| DB_remark | BMA-TAX-4 protein; contains similarity to Pfam domains PF00027 (Cyclic nucleotide-binding domain), PF00520 (Ion transport protein), PF16526 (C-terminal leucine zipper domain of cyclic nucleotide-gated channels); contains similarity to Interpro domains IPR032406 (Cyclic nucleotide-gated channel, C-terminal leucine zipper domain), IPR018490 (Cyclic nucleotide-binding domain superfamily), IPR005821 (Ion transport domain), IPR000595 (Cyclic nucleotide-binding domain), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR014710 (RmlC-like jelly roll fold) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Brugia malayi | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | augustus | |||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00227604 | ||||
| Corresponding_transcript | Bm7343.1 | |||||
| Corresponding_protein | BM48582 | |||||
| Matching_cDNA | brugia_GG6114|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| Brief_identification | cyclic-nucleotide-gated cation channel, putative | Accession_evidence | TIGR | Bm1_05590 | ||
| RNASeq_FPKM (10) | ||||||
| Last_reviewed | 24 Apr 2019 13:15:43 | WBPerson4055 | ||||
| Remark | [190424 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | |||
| From_analysis | RNASeq | |||||
| Method | curated |
