WormBase Tree Display for CDS: C48B6.3
expand all nodes | collapse all nodes | view schema
| C48B6.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C48B6 | |||
| Structure | Source_exons | 1 | 198 | |||
| 284 | 514 | |||||
| 619 | 723 | |||||
| 816 | 902 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O01512 | ||
| UniProt | UniProtAcc | O01512 | ||||
| UniProt_GCRP | UniProtAcc | O01512 | ||||
| AlphaFold | entry | O01512 | ||||
| NCBI_protein | GI_number | GI:373219371 | ||||
| TREEFAM | TREEFAM_ID | TF323292 | ||||
| Protein_id | CHROMOSOME_I | CCD67580 | 1 | |||
| DB_remark | HAPS-1 protein; contains similarity to Pfam domain PF15251 (Telomere attrition and p53 response 1 protein-like); contains similarity to Interpro domains IPR040308 (HUWE1-associated protein modifying stress responses), IPR029196 (HUWE1-associated protein modifying stress responses-like) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00016741 | ||||
| Corresponding_transcript | C48B6.3.1 | |||||
| Corresponding_protein | CE08805 | |||||
| Corresponding_PCR_product | cenix:16-c11 | |||||
| mv_C48B6.3 | ||||||
| sjj_C48B6.3 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (44) | ||||||
| RNAi_result | WBRNAi00042722 | |||||
| WBRNAi00008185 | ||||||
| WBRNAi00029938 | ||||||
| WBRNAi00094993 | ||||||
| WBRNAi00003187 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Essential protein Yae1 N-terminal domain-containing protein | Accession_evidence | UniProt | TR:O01512 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
