WormBase Tree Display for CDS: CBN02463

CBN02463 SMap: S_parent: Sequence: Cbre_Contig78
  Structure: Source_exons: 1 169
      443 597
      880 1349
      2098 2163
      2324 2521
      3333 3462
      4333 4530
      20036 20155
      21139 21210
      21848 22295
      22834 22975
      24512 24944
      25555 25643
      26576 26714
      31240 31329
      31740 31961
      32015 32298
      32992 33264
      33513 34237
      35577 35672
      35722 35881
      35931 36058
      36282 36382
      36808 36906
  DB_info: Database: TREEFAM TREEFAM_ID TF312844
    DB_remark: CBN-UNC-13.1 protein; contains similarity to Pfam domains PF00130 (Phorbol esters/diacylglycerol binding domain (C1 domain)), PF00168 (C2 domain), PF06292 (MUN domain), PF10540 (); contains similarity to Interpro domains IPR019558 (), IPR020454 (Diacylglycerol/phorbol-ester binding), IPR010439 (MUN domain), IPR002219 (Protein kinase C-like, phorbol ester/diacylglycerol-binding domain), IPR027080 (Protein Unc-13), IPR035892 (C2 domain superfamily), IPR000008 (C2 domain)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Predicted
  Visible: Gene: WBGene00141188
    Corresponding_transcript: CBN02463.1
    Corresponding_protein: CN03981
    Corresponding_oligo_set: GPL14142_CBN02463_3958-4017_0.834_59_B
      GPL14142_CBN02463_4768-4827_0.920_7_A
    Microarray_results: GPL14142_CBN02463_3958-4017_0.834_59_B
      GPL14142_CBN02463_4768-4827_0.920_7_A
    RNASeq_FPKM: WBls:0000002 0.137538 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0.692034 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.827297 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.850171 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.90161 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        0.909091 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0.931278 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        1.43533 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
      WBls:0000004 0.494472 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        10.9038 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        12.5827 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        12.8935 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        7.07641 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        9.49678 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 2.61454 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        2.85542 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 0.281657 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        0.531451 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        1.10907 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        1.56446 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        1.72522 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        1.83753 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        2.02349 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        3.05518 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        3.54915 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        4.3103 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
        4.4218 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        5.12051 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        6.94899 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
    Remark: Contig451.brenneri.jigsaw.1.mRNA1
  Method: curated