Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CBN04072

expand all nodes | collapse all nodes | view schema

Name Class

CBN04072SMapS_parentSequenceCbre_Contig28
StructureSource_exons1381
523786
DB_infoDatabaseTREEFAMTREEFAM_IDTF105836
DB_remarkcontains similarity to Pfam domain PF02466 (Tim17/Tim22/Tim23/Pmp24 family); contains similarity to Interpro domain IPR039175 (Mitochondrial import inner membrane translocase subunit TIM22)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis brenneri
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00142797
Corresponding_transcriptCBN04072.1
Corresponding_proteinCN03672
Corresponding_oligo_setGPL14142_CBN04072_118-177_0.932_14_C
GPL14142_CBN04072_189-248_0.898_26_A
Matching_cDNAFD510422Inferred_automaticallytranscript_builder.pl
FD510424Inferred_automaticallytranscript_builder.pl
FF093000Inferred_automaticallytranscript_builder.pl
FF102847Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14142_CBN04072_118-177_0.932_14_C
GPL14142_CBN04072_189-248_0.898_26_A
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
10.0769From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
13.9747From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
14.2335From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
14.425From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
14.9768From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
17.5757From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
5.48642From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
7.07469From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
26.8971From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
25.4046From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
25.609From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
25.712From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
52.4609From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
55.9647From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:000003839.4331From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
44.1288From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (15)
RemarkContig18.brenneri.jigsaw.24.mRNA24
Methodcurated