WormBase Tree Display for CDS: CBN10141

CBN10141 SMap: S_parent: Sequence: Cbre_Contig28
  Structure: Source_exons: 1 156
      204 482
  DB_info: Database: TREEFAM TREEFAM_ID TF300184
    DB_remark: CBN-SNU-13 protein; contains similarity to Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family); contains similarity to Interpro domains IPR029064 (Ribosomal protein eL30-like superfamily), IPR004038 (Ribosomal protein eL8/eL30/eS12/Gadd45), IPR018492 (Ribosomal protein eL8/Nhp2 family), IPR002415 (H/ACA ribonucleoprotein complex, subunit Nhp2-like)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00148866
    Corresponding_transcript: CBN10141.1
    Corresponding_protein: CN20833
    Corresponding_oligo_set: GPL14142_CBN10141_338-397_0.922_2_A
      GPL14142_CBN10141_38-97_0.911_3_C
      GPL14142_CBN10141_63-122_0.838_12_B
    Microarray_results: GPL14142_CBN10141_38-97_0.911_3_C
      GPL14142_CBN10141_63-122_0.838_12_B
      GPL14142_CBN10141_338-397_0.922_2_A
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        23.7932 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        31.2788 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        40.3447 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        47.9913 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        48.2944 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        50.5039 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        53.0643 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        54.6263 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        93.7643 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        1707.36 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        1828.51 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        201.854 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        229.179 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        410.561 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 132.945 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        68.9867 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (15)
    Remark: Contig18.brenneri.jigsaw.122.mRNA122
  Method: curated