WormBase Tree Display for CDS: CBN11373

CBN11373 SMap: S_parent: Sequence: Cbre_Contig28
  Structure: Source_exons: 1 27
      79 264
      311 459
      579 704
      1055 1443
      1512 1734
      1785 1907
      1956 2316
      2369 2746
      2791 2898
  DB_info: Database: TREEFAM TREEFAM_ID TF105073
    DB_remark: CBN-COX-15 protein; contains similarity to Pfam domains PF01265 (Cytochrome c/c1 heme lyase), PF02628 (Cytochrome oxidase assembly protein); contains similarity to Interpro domains IPR000511 (Holocytochrome c/c1 synthase), IPR023754 (Heme A synthase, type 2), IPR003780 (COX15/CtaA family)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00150098
    Corresponding_transcript: CBN11373.1
    Corresponding_protein: CN04788
    Corresponding_oligo_set: GPL14142_CBN11373_1035-1094_0.878_32_C
      GPL14142_CBN11373_1130-1189_0.875_34_B
      GPL14142_CBN11373_1282-1341_0.863_37_A
    Microarray_results: GPL14142_CBN11373_1035-1094_0.878_32_C
      GPL14142_CBN11373_1130-1189_0.875_34_B
      GPL14142_CBN11373_1282-1341_0.863_37_A
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        11.9227 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        16.5445 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        18.684 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        18.9805 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        22.07 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        24.7556 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        26.1552 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        26.8028 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        27.3787 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        53.3085 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        69.0271 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        73.3534 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        73.8761 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        79.3829 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 58.6911 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        59.6337 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (15)
    Remark: Contig18.brenneri.jigsaw.38.mRNA38
  Method: curated