WormBase Tree Display for CDS: CBN16751

CBN16751 SMap: S_parent: Sequence: Cbre_Contig54
  Structure: Source_exons: 1 62
      112 207
      252 335
      384 644
      696 953
      1000 1107
      1153 1266
      1316 1419
      1470 1561
  DB_info: Database: TREEFAM TREEFAM_ID TF106154
    DB_remark: CBN-MRPS-9 protein; contains similarity to Pfam domain PF00380 (Ribosomal protein S9/S16); contains similarity to Interpro domains IPR020568 (Ribosomal protein uS5 domain 2-type superfamily), IPR000754 (Small ribosomal subunit protein uS9), IPR014721 (Small ribosomal subunit protein uS5 domain 2-type fold, subgroup)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00155476
    Corresponding_transcript: CBN16751.1
    Corresponding_protein: CN16598
    Corresponding_oligo_set: GPL14142_CBN16751_1049-1108_0.666_116_C
      GPL14142_CBN16751_1143-1202_0.783_71_A
      GPL14142_CBN16751_902-961_0.950_1_B
    Matching_cDNA: FF093140 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14142_CBN16751_902-961_0.950_1_B
      GPL14142_CBN16751_1049-1108_0.666_116_C
      GPL14142_CBN16751_1143-1202_0.783_71_A
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        10.1155 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        12.0776 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        16.243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        18.2846 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        18.8138 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        21.0466 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        23.6285 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        9.51111 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        26.9445 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        16.0112 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        16.7978 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        18.5888 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        50.7602 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        54.7453 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 53.8731 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        65.1819 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
    Remark: Contig39.brenneri.jigsaw.87.mRNA87
  Method: curated