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WormBase Tree Display for CDS: CBN20778

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Name Class

CBN20778SMapS_parentSequenceCbre_Contig67
StructureSource_exons1102
351525
17282094
22452933
30323948
41274312
DB_infoDatabaseTREEFAMTREEFAM_IDTF316767
DB_remarkCBN-UNC-5.1 protein; contains similarity to Pfam domains PF00090 (Thrombospondin type 1 domain), PF00531 (Death domain), PF00791 (ZU5 domain), PF13895 (Immunoglobulin domain), PF17217 (UPA domain); contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR000884 (Thrombospondin type-1 (TSP1) repeat), IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR033772 (UPA domain), IPR011029 (Death-like domain superfamily), IPR000906 (ZU5 domain), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily), IPR007110 (Immunoglobulin-like domain), IPR003599 (Immunoglobulin subtype), IPR000488 (Death domain), IPR037936 (Netrin receptor UNC5)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis brenneri
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00159503
Corresponding_transcriptCBN20778.1
Corresponding_proteinCN13401
RNASeq_FPKM (5)
RemarkContig2075.brenneri.jigsaw.1.mRNA1
Methodcurated