Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CBN23132

expand all nodes | collapse all nodes | view schema

Name Class

CBN23132SMapS_parentSequenceCbre_Contig2
StructureSource_exons186
578767
815938
10671853
19092065
DB_infoDB_remarkCBN-ASP-4 protein; contains similarity to Pfam domain PF00026 (Eukaryotic aspartyl protease); contains similarity to Interpro domains IPR021109 (Aspartic peptidase domain superfamily), IPR033121 (Peptidase family A1 domain), IPR001461 (Aspartic peptidase A1 family)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis brenneri
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00161857
Corresponding_transcriptCBN23132.1
Corresponding_proteinCN09344
Corresponding_oligo_setGPL14142_CBN23132_1045-1104_0.944_1_A
GPL14142_CBN23132_775-834_0.929_6_B
GPL14142_CBN23132_902-961_0.906_15_C
Matching_cDNAFF086748Inferred_automaticallytranscript_builder.pl
FF090141Inferred_automaticallytranscript_builder.pl
FF090893Inferred_automaticallytranscript_builder.pl
FF092216Inferred_automaticallytranscript_builder.pl
FF097370Inferred_automaticallytranscript_builder.pl
FF106187Inferred_automaticallytranscript_builder.pl
FF108404Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14142_CBN23132_775-834_0.929_6_B
GPL14142_CBN23132_902-961_0.906_15_C
GPL14142_CBN23132_1045-1104_0.944_1_A
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
119.013From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
136.662From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
137.585From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
180.5From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
190.628From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
213.887From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
344.226From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
686.106From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:000000444.7212From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
474.786From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
102.444From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
42.1266From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
49.6124From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
65.2599From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
99.4179From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:0000038312.213From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
332.612From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (16)
RemarkContig203.brenneri.jigsaw.5.mRNA5
Methodcurated