WormBase Tree Display for CDS: CBN24528

CBN24528 SMap: S_parent: Sequence: Cbre_Contig28
  Structure: Source_exons: 1 138
      305 1032
      1078 1207
  DB_info: DB_remark: CBN-DNJ-13 protein; contains similarity to Pfam domains PF00226 (DnaJ domain), PF01556 (DnaJ C terminal domain); contains similarity to Interpro domains IPR008971 (HSP40/DnaJ peptide-binding), IPR036869 (Chaperone J-domain superfamily), IPR002939 (Chaperone DnaJ, C-terminal), IPR001623 (DnaJ domain)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00163253
    Corresponding_transcript: CBN24528.1
    Corresponding_protein: CN30429
    Corresponding_oligo_set: GPL14142_CBN24528_545-604_0.897_14_C
    Matching_cDNA: FF085799 Inferred_automatically: transcript_builder.pl
      FF092366 Inferred_automatically: transcript_builder.pl
      FF094608 Inferred_automatically: transcript_builder.pl
      FF099216 Inferred_automatically: transcript_builder.pl
      FF099864 Inferred_automatically: transcript_builder.pl
      FF102542 Inferred_automatically: transcript_builder.pl
      FF106114 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14142_CBN24528_545-604_0.897_14_C
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        26.7435 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        48.8544 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        60.8208 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        63.1885 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        66.4981 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        68.8076 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        69.2354 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        91.8801 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        226.755 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        131.443 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        141.995 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        55.9999 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        61.5333 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        72.6673 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 154.043 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        160.433 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (15)
    Remark: [20081101 mh] original nGASP gene : Contig674.brenneri.jigsaw.16.mRNA16
      [20081113 db] corrected translation frame of this protein
  Method: curated