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WormBase Tree Display for CDS: CJA01329

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Name Class

CJA01329SMapS_parentSequenceCjap.Contig18205
StructureSource_exons (14)
DB_infoDB_remarkCJP-FBL-1 protein; contains similarity to Pfam domains PF07645 (Calcium-binding EGF domain), PF12662 (Complement Clr-like EGF-like); contains similarity to Interpro domains IPR000742 (EGF-like domain), IPR026823 (Complement Clr-like EGF domain), IPR001881 (EGF-like calcium-binding domain), IPR009030 (Growth factor receptor cysteine-rich domain superfamily), IPR017048 (Fibulin-1)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00120533
Corresponding_transcriptCJA01329.1
Corresponding_proteinJA63412
Corresponding_oligo_setGPL14145_CJA01329_892-951_0.834_17_A
GPL14145_CJA01329_1021-1080_0.824_21_B
GPL14145_CJA01329_1431-1490_0.678_81_C
GPL14145_CJA27992_412-471_0.955_1_A
Microarray_resultsGPL14145_CJA01329_1021-1080_0.824_21_B
GPL14145_CJA01329_1431-1490_0.678_81_C
GPL14145_CJA01329_892-951_0.834_17_A
GPL14145_CJA27992_412-471_0.955_1_A
RNASeq_FPKMWBls:00000047.31878From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000275.89158From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000384.247From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
5.52011From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000412.36002From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
3.35856From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.84264From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
4.05369From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
4.16421From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
4.19801From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
4.23065From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
5.10435From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
Remarkbased on Augustus prediction Cjap.Contig18205.g28353.t1[100726 mh6]
Methodcurated