WormBase Tree Display for CDS: CJA01711
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CJA01711 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Cjap.Contig4283 | ||
Structure | Source_exons | 1 | 146 | ||
188 | 369 | ||||
2375 | 2695 | ||||
3600 | 3871 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF105624 | |
DB_remark | CJP-UNC-50 protein; contains similarity to Pfam domain PF05216 (UNC-50 family); contains similarity to Interpro domain IPR007881 (UNC-50) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis japonica | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00120915 | |||
Corresponding_transcript | CJA01711.1 | ||||
Corresponding_protein | JA13905 | ||||
Corresponding_oligo_set | GPL14145_CJA01711_252-311_0.863_1_A | ||||
GPL14145_CJA01711_768-827_0.761_17_B | |||||
GPL14145_CJA01711_871-930_0.793_12_C | |||||
Matching_cDNA | FF119548 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results | GPL14145_CJA01711_252-311_0.863_1_A | ||||
GPL14145_CJA01711_768-827_0.761_17_B | |||||
GPL14145_CJA01711_871-930_0.793_12_C | |||||
RNASeq_FPKM (4) | |||||
Remark | based on Augustus prediction Cjap.Contig4283.g3094.t1[100726 mh6] | ||||
Method | curated |