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WormBase Tree Display for CDS: CJA02856a

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Name Class

CJA02856aSMapS_parentSequenceCjap.Contig18184
StructureSource_exons1142
200310
368525
579632
683793
837982
11841445
20382217
DB_infoDB_remarkCJP-SULP-7 protein; contains similarity to Pfam domain PF00916 (Sulfate permease family); contains similarity to Interpro domains IPR030341 (), IPR001902 (SLC26A/SulP transporter), IPR011547 (SLC26A/SulP transporter domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00122060
Corresponding_transcriptCJA02856a.1
Corresponding_proteinJA43297
Corresponding_oligo_setGPL14145_CJA02856_1029-1088_0.915_4_A
GPL14145_CJA02856_1121-1180_0.916_3_B
Microarray_resultsGPL14145_CJA02856_1029-1088_0.915_4_A
GPL14145_CJA02856_1121-1180_0.916_3_B
RNASeq_FPKMWBls:00000042.1e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.011815From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.45621From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
8.3e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.000178From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.006348From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.141268From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.299624From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.326674From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.37635From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.637543From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.659115From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
Remarkbased on Augustus prediction Cjap.Contig18184.g27174.t1[100726 mh6]
Methodcurated