WormBase Tree Display for CDS: CJA07019b
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CJA07019b | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Cjap.Contig16626 | ||
Structure | Source_exons | 1 | 46 | ||
979 | 1142 | ||||
1206 | 1583 | ||||
2484 | 3453 | ||||
4744 | 5112 | ||||
5516 | 5605 | ||||
7004 | 7104 | ||||
7281 | 7763 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF321506 | |
DB_remark | CJP-UNC-40 protein; contains similarity to Pfam domain PF00041 (Fibronectin type III domain); contains similarity to Interpro domains IPR003961 (Fibronectin type III), IPR013783 (Immunoglobulin-like fold), IPR036116 (Fibronectin type III superfamily) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis japonica | ||||
Properties | Coding (2) | ||||
Isoform | |||||
Visible | Gene | WBGene00126223 | |||
Corresponding_transcript | CJA07019b.1 | ||||
Corresponding_protein | JA57681 | ||||
Corresponding_oligo_set | GPL14145_CJA07019_482-541_0.371_421_B | ||||
GPL14145_CJA07019_1470-1529_0.717_51_A | |||||
GPL14145_CJA07019_2602-2661_0.452_216_C | |||||
Microarray_results | GPL14145_CJA07019_1470-1529_0.717_51_A | ||||
GPL14145_CJA07019_2602-2661_0.452_216_C | |||||
GPL14145_CJA07019_482-541_0.371_421_B | |||||
RNASeq_FPKM (4) | |||||
Remark | based on Augustus prediction Cjap.Contig16626.g12176.t2[100726 mh6] | ||||
Method | curated |