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WormBase Tree Display for CDS: CJA13357

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Name Class

CJA13357EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig17232
StructureSource_exons1219
261585
643827
13181802
34173582
DB_infoDB_remarkCJP-UNC-122 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF02191 (Olfactomedin-like domain); contains similarity to Interpro domains IPR003112 (Olfactomedin-like domain), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00132561
Corresponding_transcriptCJA13357.1
Corresponding_proteinJA68351
Corresponding_oligo_setGPL14145_CJA13357_544-603_0.869_24_C
GPL14145_CJA13357_976-1035_0.874_21_B
GPL14145_CJA13357_1191-1250_0.707_129_A
Matching_cDNA (2)
Microarray_resultsGPL14145_CJA13357_1191-1250_0.707_129_A
GPL14145_CJA13357_544-603_0.869_24_C
GPL14145_CJA13357_976-1035_0.874_21_B
RNASeq_FPKM (4)
Remarkbased on Augustus prediction Cjap.Contig17232.g15047.t1[100726 mh6]
[20120529 po]modified a splice to remove an internal stop
Methodcurated