Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CJA15756b

expand all nodes | collapse all nodes | view schema

Name Class

CJA15756bSMapS_parentSequenceCjap.Contig18184
StructureSource_exons1134
184420
470629
683826
14201511
15581648
22502465
DB_infoDB_remarkCJP-GNRR-3 protein; contains similarity to Pfam domain PF00001 (7 transmembrane receptor (rhodopsin family)); contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like, 7TM), IPR000276 (G protein-coupled receptor, rhodopsin-like)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00134960
Corresponding_transcriptCJA15756b.1
Corresponding_proteinJA52141
Corresponding_oligo_setGPL14145_CJA15756_208-267_0.877_32_A
GPL14145_CJA15756_276-335_0.686_131_B
GPL14145_CJA15756_1108-1167_0.962_1_C
Microarray_resultsGPL14145_CJA15756_1108-1167_0.962_1_C
GPL14145_CJA15756_208-267_0.877_32_A
GPL14145_CJA15756_276-335_0.686_131_B
RNASeq_FPKMWBls:00000040From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
2e-06From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.056176From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
2e-06From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.8e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
3e-06From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
4e-06From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
Remarkbased on Augustus prediction Cjap.Contig18184.g27268.t1[100726 mh6]
Methodcurated