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WormBase Tree Display for CDS: CJA21120a

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Name Class

CJA21120aSMapS_parentSequenceCjap.Contig17205
StructureSource_exons145
11691698
17771950
32373750
DB_infoDatabaseTREEFAMTREEFAM_IDTF352677
DB_remarkCJP-UNC-83 protein
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
Isoform
VisibleGeneWBGene00176692
Corresponding_transcriptCJA21120a.1
Corresponding_proteinJA52242
Corresponding_oligo_setGPL14145_CJA21120_731-790_0.945_1_A
GPL14145_CJA21120_846-905_0.867_12_B
GPL14145_CJA21120_1102-1161_0.855_15_C
Matching_cDNAFF115448Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA21120_1102-1161_0.855_15_C
GPL14145_CJA21120_731-790_0.945_1_A
GPL14145_CJA21120_846-905_0.867_12_B
RNASeq_FPKMWBls:000000462.3396From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002752.0145From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003843.4797From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
45.1156From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004111.3261From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
23.1485From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
36.5565From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
36.7117From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
40.9159From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
76.6502From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
90.1168From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
93.2956From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
Remarkbased on Augustus prediction Cjap.Contig17205.g14746.t2[100726 mh6]
Methodcurated