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WormBase Tree Display for CDS: CJA22689

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Name Class

CJA22689EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceCjap.Contig353
StructureSource_exons1392
441782
DB_infoDB_remarkcontains similarity to Pfam domain PF07714 (Protein tyrosine and serine/threonine kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPredicted
End_not_found
VisibleGeneWBGene00178261
Corresponding_transcriptCJA22689.1
Corresponding_proteinJA57007
Corresponding_oligo_setGPL14145_CJA22689_333-392_0.913_8_B
Microarray_resultsGPL14145_CJA22689_333-392_0.913_8_B
RNASeq_FPKMWBls:00000040.193975From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.281876From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.021608From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.077424From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.08829From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.103054From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
10.4251From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
10.9718From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
12.0241From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
12.2647From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
Remarkbased on Augustus prediction Cjap.Contig353.g328.t1[100726 mh6]
Methodcurated