WormBase Tree Display for CDS: CJA22978
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CJA22978 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Cjap.Contig8538 | ||
Structure | Source_exons | 1 | 189 | ||
971 | 1177 | ||||
DB_info | DB_remark | CJP-COF-2.2 protein; contains similarity to Pfam domain PF02191 (Olfactomedin-like domain); contains similarity to Interpro domain IPR003112 (Olfactomedin-like domain) | |||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis japonica | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00178550 | |||
Corresponding_transcript | CJA22978.1 | ||||
CJA22978.2 | |||||
Corresponding_protein | JA46229 | ||||
Corresponding_oligo_set | GPL14145_CJA22978_351-410_0.907_12_C | ||||
GPL14145_CJA22978_452-511_0.964_2_B | |||||
GPL14145_CJA22978_547-606_0.974_1_A | |||||
Matching_cDNA | japonica_GG10856|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||
japonica_GG10856|c0_g1_i2 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14145_CJA22978_351-410_0.907_12_C | ||||
GPL14145_CJA22978_452-511_0.964_2_B | |||||
GPL14145_CJA22978_547-606_0.974_1_A | |||||
RNASeq_FPKM (4) | |||||
Remark | based on Augustus prediction Cjap.Contig8538.g5940.t1[100726 mh6] | ||||
Method | curated |