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WormBase Tree Display for CDS: CJA32002

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Name Class

CJA32002EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig16462
StructureSource_exons1882
DB_infoDB_remarkcontains similarity to Pfam domain PF00041 (Fibronectin type III domain); contains similarity to Interpro domains IPR003961 (Fibronectin type III), IPR043204 (), IPR013783 (Immunoglobulin-like fold), IPR036116 (Fibronectin type III superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00207849
Corresponding_transcriptCJA32002.1
Corresponding_proteinJA48889
Corresponding_oligo_setGPL14145_CJA19194_2042-2101_0.828_31_C
GPL14145_CJA19194_2082-2141_0.878_8_B
Microarray_resultsGPL14145_CJA19194_2042-2101_0.828_31_C
GPL14145_CJA19194_2082-2141_0.878_8_B
RNASeq_FPKMWBls:000000421.8157From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002716.0451From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003810.9531From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
15.9287From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004114.7559From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
15.3765From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
17.3944From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
4.88567From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
5.226From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
5.94998From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
6.00873From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
6.43103From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig16462.g11609.t1[100726 mh6]
Methodcurated