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WormBase Tree Display for CDS: CJA35746

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Name Class

CJA35746EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig16807
StructureSource_exons1102
309483
38164182
42504909
54235444
DB_infoDB_remarkCJP-UNC-5 protein; contains similarity to Pfam domains PF00090 (Thrombospondin type 1 domain), PF13895 (Immunoglobulin domain); contains similarity to Interpro domains IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR007110 (Immunoglobulin-like domain), IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR000884 (Thrombospondin type-1 (TSP1) repeat), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily), IPR037936 (Netrin receptor UNC5)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00211593
Corresponding_transcriptCJA35746.1
Corresponding_proteinJA55552
Matching_cDNAFF122066Inferred_automaticallytranscript_builder.pl
RNASeq_FPKM (4)
Remarkbased on Augustus prediction Cjap.Contig16807.g12778.t1[100726 mh6]
Methodcurated