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WormBase Tree Display for CDS: CRE25611

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Name Class

CRE25611SMapS_parentSequenceCrem_Contig7
StructureSource_exons1117
179244
344541
8351511
16151791
18431936
19882143
21952661
27162799
37093874
DB_infoDatabaseTREEFAMTREEFAM_IDTF319048
DB_remarkCRE-TAX-4 protein; contains similarity to Pfam domains PF00027 (Cyclic nucleotide-binding domain), PF00520 (Ion transport protein), PF16526 (C-terminal leucine zipper domain of cyclic nucleotide-gated channels); contains similarity to Interpro domains IPR032406 (Cyclic nucleotide-gated channel, C-terminal leucine zipper domain), IPR018490 (Cyclic nucleotide-binding domain superfamily), IPR000595 (Cyclic nucleotide-binding domain), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR005821 (Ion transport domain), IPR014710 (RmlC-like jelly roll fold)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00055150
Corresponding_transcriptCRE25611.1
Corresponding_proteinRP03418
Corresponding_oligo_setGPL14146_CRE25611_1589-1648_0.917_11_B
GPL14146_CRE25611_1800-1859_0.829_67_C
GPL14146_CRE25611_1985-2044_0.900_19_A
Microarray_resultsGPL14146_CRE25611_1589-1648_0.917_11_B
GPL14146_CRE25611_1800-1859_0.829_67_C
GPL14146_CRE25611_1985-2044_0.900_19_A
RNASeq_FPKM (6)
Methodcurated