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WormBase Tree Display for CDS: CRE26994

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Name Class

CRE26994SMapS_parentSequenceCrem_Contig5
StructureSource_exons120
64220
2671352
14091505
19362060
39544073
DB_infoDatabaseTREEFAMTREEFAM_IDTF300782
DB_remarkCRE-SKP-1 protein; contains similarity to Pfam domain PF02731 (SKIP/SNW domain); contains similarity to Interpro domains IPR004015 (SKI-interacting protein SKIP, SNW domain), IPR017862 (SKI-interacting protein, SKIP)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00052328
Corresponding_transcriptCRE26994.1
Corresponding_proteinRP45765
Corresponding_oligo_setGPL14146_CRE26994_515-574_0.892_25_C
GPL14146_CRE26994_684-743_0.825_98_B
GPL14146_CRE26994_1166-1225_0.928_4_A
Matching_cDNADT936188Inferred_automaticallytranscript_builder.pl
DR781343Inferred_automaticallytranscript_builder.pl
DY528348Inferred_automaticallytranscript_builder.pl
DY526832Inferred_automaticallytranscript_builder.pl
DY525961Inferred_automaticallytranscript_builder.pl
DR780464Inferred_automaticallytranscript_builder.pl
DR782505Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14146_CRE26994_1166-1225_0.928_4_A
GPL14146_CRE26994_515-574_0.892_25_C
GPL14146_CRE26994_684-743_0.825_98_B
RNASeq_FPKMWBls:0000004206.989From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
215.951From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (54)
WBls:000002714.6687From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
43.7281From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
48.8225From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
56.3342From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:000003812.7445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
42.0679From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
45.1609From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041103.593From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
107.459From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
35.2857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
37.7368From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
39.6945From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
92.9636From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:000006325.7186From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
27.0461From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
29.393From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
30.016From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
31.026From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
31.57From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
37.5642From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
37.7551From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
40.991From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
41.4706From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
Methodcurated