Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CRE29450

expand all nodes | collapse all nodes | view schema

Name Class

CRE29450SMapS_parentSequenceCrem_Contig9
StructureSource_exons156
157267
359859
9081000
10461290
13381522
18632327
DB_infoDatabaseTREEFAMTREEFAM_IDTF300647
DB_remarkCRE-FARS-1 protein; contains similarity to Pfam domains PF01409 (tRNA synthetases class II core domain (F)), PF18552 (PheRS DNA binding domain 1), PF18553 (PheRS DNA binding domain 3); contains similarity to Interpro domains IPR004529 (Phenylalanyl-tRNA synthetase, class IIc, alpha subunit), IPR040725 (PheRS, DNA binding domain 3), IPR002319 (Phenylalanyl-tRNA synthetase), IPR040724 (PheRS, DNA binding domain 1)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00064293
Corresponding_transcriptCRE29450.1
Corresponding_proteinRP13981
Corresponding_oligo_setGPL14146_CRE29450_495-554_0.863_42_B
GPL14146_CRE29450_702-761_0.820_83_A
GPL14146_CRE29450_792-851_0.873_38_C
Matching_cDNADT933430Inferred_automaticallytranscript_builder.pl
DT935547Inferred_automaticallytranscript_builder.pl
DY524767Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14146_CRE29450_495-554_0.863_42_B
GPL14146_CRE29450_702-761_0.820_83_A
GPL14146_CRE29450_792-851_0.873_38_C
RNASeq_FPKMWBls:000000483.5856From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
85.8096From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (54)
WBls:0000027108.737From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
112.814From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
115.95From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
14.635From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038103.32From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
113.865From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
18.4461From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041106.088From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
111.147From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
62.8505From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
64.4429From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
65.0433From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
96.3395From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:000006355.3095From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
56.9739From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
59.2268From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
62.8524From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
65.0979From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
65.4406From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
66.0645From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
68.3979From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
70.2471From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
94.5103From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
Methodcurated