WormBase Tree Display for CDS: F07A11.2a
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| F07A11.2a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F07A11 | |||
| Structure | Source_exons | 1 | 676 | |||
| 751 | 789 | |||||
| 919 | 951 | |||||
| 1003 | 1059 | |||||
| 1313 | 1593 | |||||
| 1642 | 2484 | |||||
| 2530 | 2733 | |||||
| 2787 | 2831 | |||||
| DB_info | Database | KEGG | KEGG_id | 2.6.1.16 | ||
| TrEMBL | UniProtAcc | Q19130 | ||||
| UniProt | UniProtAcc | Q19130 | ||||
| UniProt_GCRP | UniProtAcc | Q19130 | ||||
| AlphaFold | entry | Q19130 | ||||
| NCBI_protein | GI_number | GI:3875532 | ||||
| TREEFAM | TREEFAM_ID | TF300864 | ||||
| Protein_id | CHROMOSOME_II | CAA91315 | 1 | |||
| DB_remark | GFAT-1 protein; contains similarity to Pfam domains PF01380 (SIS domain), PF13522 (Glutamine amidotransferase domain); contains similarity to Interpro domains IPR046348 (SIS domain superfamily), IPR029055 (Nucleophile aminohydrolases, N-terminal), IPR001347 (SIS domain), IPR005855 (Glucosamine-fructose-6-phosphate aminotransferase, isomerising) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | BJ807216 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00008546 | ||||
| Corresponding_transcript | F07A11.2a.1 | |||||
| F07A11.2a.2 | ||||||
| Corresponding_protein | CE03144 | |||||
| Corresponding_PCR_product | cenix:10-d2 | |||||
| mv_F07A11.2 | ||||||
| sjj_F07A11.2 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (100) | ||||||
| RNAi_result | WBRNAi00025011 | |||||
| WBRNAi00085584 | ||||||
| WBRNAi00008604 | ||||||
| WBRNAi00094861 | ||||||
| WBRNAi00043841 | ||||||
| WBRNAi00030589 | ||||||
| WBRNAi00022653 | ||||||
| WBRNAi00008075 | ||||||
| Microarray_results (23) | ||||||
| Brief_identification | glutamine--fructose-6-phosphate transaminase (isomerizing) | Accession_evidence | UniProt | TR:Q19130 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
