WormBase Tree Display for CDS: F11C1.6a
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F11C1.6a | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F11C1 | ||
Structure | Source_exons | 1 | 117 | ||
375 | 407 | ||||
500 | 608 | ||||
1448 | 1631 | ||||
1682 | 1806 | ||||
1856 | 2143 | ||||
2259 | 2533 | ||||
2860 | 2978 | ||||
3437 | 3682 | ||||
4100 | 4322 | ||||
DB_info | Database | SwissProt | UniProtAcc | Q19345 | |
UniProtIsoformAcc | Q19345-1 | ||||
UniProt | UniProtAcc | Q19345 | |||
UniProt_GCRP | UniProtAcc | Q19345 | |||
AlphaFold | entry | Q19345 | |||
NCBI_protein | GI_number | GI:3875724 | |||
TREEFAM | TREEFAM_ID | TF350737 | |||
Protein_id | CHROMOSOME_X | CAA91028 | 1 | ||
DB_remark | NHR-25 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR001723 (Nuclear hormone receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR016355 (Nuclear hormone receptor family 5-like), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | BJ151634 | ||
Inferred_automatically | transcript_builder | ||||
Visible (12) | |||||
Associated_feature | WBsf007424 | ||||
WBsf027857 | |||||
Method | curated |