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WormBase Tree Display for CDS: F53B7.3

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Name Class

F53B7.3EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF53B7
StructureSource_exons172
139213
257411
459960
DB_infoDatabaseSwissProtUniProtAccQ20716
UniProtUniProtAccQ20716
UniProt_GCRPUniProtAccQ20716
AlphaFoldentryQ20716
NCBI_proteinGI_numberGI:3877439
TREEFAMTREEFAM_IDTF105841
Protein_idCHROMOSOME_VCAA966521
DB_remarkISY-1 protein; contains similarity to Pfam domain PF06246 (Isy1-like splicing family); contains similarity to Interpro domains IPR029012 (Helix hairpin bin domain superfamily), IPR009360 (Pre-mRNA-splicing factor Isy1), IPR037200 (Pre-mRNA-splicing factor Isy1 superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00009966
Corresponding_transcriptF53B7.3.1
Corresponding_proteinCE05922
Corresponding_PCR_productcenix:39-d2
mv_F53B7.3
sjj_F53B7.3
Corresponding_oligo_set (18)
Matching_cDNA (52)
RNAi_result (14)
Microarray_results (21)
Brief_identificationProtein isy-1Accession_evidenceUniProtSP:Q20716
RNASeq_FPKM (74)
Associated_featureWBsf015101
Methodcurated