WormBase Tree Display for CDS: F53B7.3
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F53B7.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F53B7 | |||
Structure | Source_exons | 1 | 72 | |||
139 | 213 | |||||
257 | 411 | |||||
459 | 960 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q20716 | ||
UniProt | UniProtAcc | Q20716 | ||||
UniProt_GCRP | UniProtAcc | Q20716 | ||||
AlphaFold | entry | Q20716 | ||||
NCBI_protein | GI_number | GI:3877439 | ||||
TREEFAM | TREEFAM_ID | TF105841 | ||||
Protein_id | CHROMOSOME_V | CAA96652 | 1 | |||
DB_remark | ISY-1 protein; contains similarity to Pfam domain PF06246 (Isy1-like splicing family); contains similarity to Interpro domains IPR029012 (Helix hairpin bin domain superfamily), IPR009360 (Pre-mRNA-splicing factor Isy1), IPR037200 (Pre-mRNA-splicing factor Isy1 superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00009966 | ||||
Corresponding_transcript | F53B7.3.1 | |||||
Corresponding_protein | CE05922 | |||||
Corresponding_PCR_product | cenix:39-d2 | |||||
mv_F53B7.3 | ||||||
sjj_F53B7.3 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (52) | ||||||
RNAi_result (14) | ||||||
Microarray_results (21) | ||||||
Brief_identification | Protein isy-1 | Accession_evidence | UniProt | SP:Q20716 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf015101 | |||||
Method | curated |