WormBase Tree Display for CDS: F56C9.10b
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| F56C9.10b | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56C9 | |||
| Structure | Source_exons | 1 | 120 | |||
| 1328 | 1510 | |||||
| 1687 | 2178 | |||||
| 2295 | 2705 | |||||
| 2787 | 2882 | |||||
| 2929 | 4264 | |||||
| 4319 | 4449 | |||||
| 4567 | 4893 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q8MQ22 | ||
| UniProt | UniProtAcc | Q8MQ22 | ||||
| AlphaFold | entry | Q8MQ22 | ||||
| NCBI_protein | GI_number | GI:351065847 | ||||
| TREEFAM | TREEFAM_ID | TF105856 | ||||
| Protein_id | CHROMOSOME_III | CCD61834 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF21034 (BCAS3, WD40 repeat); contains similarity to Interpro domains IPR048382 (BCAS3, WD40 domain), IPR036322 (WD40-repeat-containing domain superfamily), IPR045142 (BCAS3-like), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | AV190379 | |||
| Visible | Gene | WBGene00018953 | ||||
| Corresponding_transcript | F56C9.10b.1 | |||||
| Corresponding_protein | CE31003 | |||||
| Corresponding_PCR_product | TH:305C4 | |||||
| cenix:305-c4 | ||||||
| mv_F56C9.10 | ||||||
| sjj_F56C9.10 | ||||||
| Corresponding_oligo_set (19) | ||||||
| Matching_cDNA (46) | ||||||
| RNAi_result | WBRNAi00005403 | |||||
| WBRNAi00015799 | ||||||
| WBRNAi00048668 | ||||||
| WBRNAi00032946 | ||||||
| WBRNAi00002390 | ||||||
| Microarray_results (23) | ||||||
| Brief_identification | BCAS3 WD40 domain-containing protein | Accession_evidence | UniProt | TR:Q8MQ22 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
