WormBase Tree Display for CDS: K01G5.7
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K01G5.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K01G5 | |||
Structure | Source_exons | 1 | 166 | |||
212 | 1017 | |||||
1068 | 1445 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O17921 | ||
UniProt | UniProtAcc | O17921 | ||||
UniProt_GCRP | UniProtAcc | O17921 | ||||
AlphaFold | entry | O17921 | ||||
NCBI_protein | GI_number | GI:3924793 | ||||
Protein_id | CHROMOSOME_III | CAB07246 | 1 | |||
DB_remark | TBB-1 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain), PF03953 (Tubulin C-terminal domain); contains similarity to Interpro domains IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR023123 (Tubulin, C-terminal), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR002453 (Beta tubulin), IPR037103 (Tubulin/FtsZ-like, C-terminal domain), IPR036525 (Tubulin/FtsZ, GTPase domain superfamily), IPR008280 (Tubulin/FtsZ, C-terminal) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006536 | ||||
Corresponding_transcript | K01G5.7.1 | |||||
Corresponding_protein | CE16197 | |||||
Corresponding_PCR_product | TH:320e11 | |||||
TH:340d5 | ||||||
cenix:320-e11 | ||||||
cenix:340-d5 | ||||||
mv_G_YK1720 | ||||||
sjj_K01G5.7 | ||||||
Corresponding_oligo_set (11) | ||||||
Matching_cDNA (245) | ||||||
RNAi_result (29) | ||||||
Microarray_results (13) | ||||||
Brief_identification | Tubulin beta chain | Accession_evidence | UniProt | TR:O17921 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf000419 | |||||
Method | curated |