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WormBase Tree Display for CDS: OVOC11398

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Name Class

OVOC11398EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM4_137
StructureSource_exons (25)
DB_infoDB_remarkcontains similarity to Pfam domain PF07885 (Ion channel); contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR013099 (Potassium channel domain)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00248207
Corresponding_transcriptOVOC11398.1
Corresponding_proteinOVP13016
Matching_cDNAovolvulus_GG965|c244_g2_i4Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001071.40916From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.300102From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
1.65196From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.6463From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006643.13709From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
5.88575From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140303 es9] Merged OVOC11398, OVOC11399, OVOC11400 and OVOC11401 based on RNA-Seq and Compara evidence.Curator_confirmedWBPerson2062
Methodcurated