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WormBase Tree Display for CDS: OVOC196

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Name Class

OVOC196EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons188
544971
14551508
17991919
23392490
29963163
33693545
38814005
42334380
DB_infoDB_remarkcontains similarity to Interpro domain IPR042530 (EME1/EME2, C-terminal domain)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237005
Corresponding_transcriptOVOC196.1
Corresponding_proteinOVP13354
Matching_cDNAAI130600Inferred_automaticallytranscript_builder.pl
ovolvulus_GG621|c18_g4_i2Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001075.85201From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001081.05372From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
13.2307From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
7.64149From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006647.36218From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
9.80063From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Remark[140305 es9] Splice sites of OVOC196 gene model corrected using RNA-Seq, protein evidence, SL1 and mRNA data.Curator_confirmedWBPerson2062
Methodcurated