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WormBase Tree Display for CDS: OVOC215

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Name Class

OVOC215SMapS_parentSequenceOVOC_OM1b_7
StructureSource_exons (13)
DB_infoDB_remarkOVO-SNF-8 protein; contains similarity to Pfam domain PF00209 (Sodium:neurotransmitter symporter family); contains similarity to Interpro domains IPR000175 (Sodium:neurotransmitter symporter), IPR037272 (Sodium:neurotransmitter symporter superfamily)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00237024
Corresponding_transcriptOVOC215.1
Corresponding_proteinOVP01003
Matching_cDNAovolvulus_GG637|c1_g1_i6Inferred_automaticallytranscript_builder.pl
Brief_identificationSodium-dependent serotonin transporter homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (13)
WBls:00001072.41331From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.576726From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
0.913961From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
0.914674From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006640.806115From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
2.03733From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Methodcurated