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WormBase Tree Display for CDS: OVOC2305

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Name Class

OVOC2305SMapS_parentSequenceOVOC_OM1b_113
StructureSource_exons181
546685
10731259
17892058
24912735
29363134
DB_infoDB_remarkOVO-IDHB-1 protein; contains similarity to Pfam domain PF00180 (Isocitrate/isopropylmalate dehydrogenase); contains similarity to Interpro domains IPR004434 (Isocitrate dehydrogenase NAD-dependent), IPR024084 (Isopropylmalate dehydrogenase-like domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
Start_not_found1
VisibleGeneWBGene00239114
Corresponding_transcriptOVOC2305.1
Corresponding_proteinOVP00041
Matching_cDNAovolvulus_GG550|c88_g1_i4Inferred_automaticallytranscript_builder.pl
Brief_identificationPutative isocitrate dehydrogenase [NAD] subunit beta, mitochondrialPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:000010726.5486From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010825.4521From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
27.5926From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
27.7989From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066450.7394From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
85.0334From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated