WormBase Tree Display for CDS: OVOC234
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| OVOC234 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_7 | |||
| Structure | Source_exons | 1 | 111 | |||
| 341 | 498 | |||||
| 1008 | 1173 | |||||
| 1491 | 1650 | |||||
| 1982 | 2358 | |||||
| DB_info | DB_remark | OVO-MRPL-15 protein; contains similarity to Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A); contains similarity to Interpro domains IPR021131 (Large ribosomal subunit protein uL15/eL18), IPR036227 (Large ribosomal subunit protein uL15/eL18 superfamily), IPR005749 (Large ribosomal subunit protein uL15, bacterial-type) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00237043 | ||||
| Corresponding_transcript | OVOC234.1 | |||||
| OVOC234.2 | ||||||
| Corresponding_protein | OVP05023 | |||||
| Matching_cDNA | ovolvulus_GG615|c42_g1_i5 | Inferred_automatically | transcript_builder.pl | |||
| ovolvulus_GG615|c42_g1_i8 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG615|c42_g1_i12 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG615|c42_g1_i14 | Inferred_automatically | transcript_builder.pl | ||||
| ovolvulus_GG615|c42_g1_i15 | Inferred_automatically | transcript_builder.pl | ||||
| Brief_identification | 39S ribosomal protein L15, mitochondrial homolog | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 4.19051 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 3.23742 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
| 6.94976 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 7.28219 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| WBls:0000664 | 5.62882 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 6.90756 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Method | curated |
