WormBase Tree Display for CDS: OVOC253

OVOC253 Evidence: Curator_confirmed: WBPerson2062
  SMap: S_parent: Sequence: OVOC_OM1b_7
  Structure: Source_exons (59)
  DB_info: DB_remark: contains similarity to Pfam domains PF00028 (Cadherin domain), PF01049 (Cadherin, Y-type LIR-motif), PF02210 (Laminin G domain); contains similarity to Interpro domains IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily), IPR000233 (Cadherin, Y-type LIR-motif), IPR027397 (Catenin binding domain superfamily), IPR002126 (Cadherin-like), IPR000742 (EGF-like domain), IPR001791 (Laminin G domain), IPR015919 (Cadherin-like superfamily)
  Origin: From_laboratory: MBM
    Species: Onchocerca volvulus
  Properties: Coding: CDS
      Prediction_status: Confirmed
  Visible: Gene: WBGene00237062
    Corresponding_transcript: OVOC253.1
    Corresponding_protein: OVP13301
    Brief_identification: Cadherin-related hmr-1 homolog Person_evidence: WBPerson2973
    RNASeq_FPKM: WBls:0000104 (15)
      WBls:0000107 3.97777 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 22.2459 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        24.5758 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        3.70983 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
      WBls:0000664 1.76365 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        1.79724 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    Remark: [140217 es9] Merged OVOC253, OVOC252, OVOC251 and OVOC250 based on RNA-Seq and Compara data. Curator_confirmed: WBPerson2062
  Method: curated